CyVerse Container Camp 2021

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Getting Started

Learning objectives
Code of Conduct
Pre-Workshop Setup
Container Basics Schedule
Advanced Container Camp Schedule
About CyVerse

Workshop Topics

Introduction to Reproducible Science
Basics of Linux

Docker

Finding the perfect container
Introduction to Docker
Docker Build
Advanced Docker

Singularity

Introduction to SingularityCE
Advanced Singularity
Setting up Singularity file system
Singularity and High Performance Computing

Breakout Sessions

BioContainers
Containerized Workflows
Docker for Data Science

CyVerse Topics

Booting a CyVerse Atmosphere instance
Tool integration in the Discovery Environment (DE)

Useful Resources

Docker related resources
Singularity related resources
Campus HPC resources
Singularity Talks

Instructions and Reporting

For instructors!
Problems? Bugs? Questions?

CyVerse Container Camp 2021

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